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Universität zu KölnFachgruppe PhysikTheoretische PhysikAG PortoMarkus Porto

Publications and talks

Content

In case you are interested in citations etc., you might want to use my ResearcherID A-6546-2009.

Regular Articles in International Journals

(1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, and latest)

(R1)
Are branched polymers in the universality class of percolation?
A. Bunde, S. Havlin, and M. Porto, Phys. Rev. Lett. 74, 2714-2716 (1995).
(R2)
Branched polymers in the presence of impurities
M. Porto, A. Shehter, A. Bunde, and S. Havlin, Phys. Rev. E 54, 1742-1748 (1996).
(R3)
Structural and dynamical properties of the percolation backbone in two and three dimensions
M. Porto, A. Bunde, S. Havlin, and H.E. Roman, Phys. Rev. E 56, 1667-1675 (1997).
(R4)
Optimal path in strong disorder and shortest path in invasion percolation with trapping
M. Porto, S. Havlin, S. Schwarzer, and A. Bunde, Phys. Rev. Lett. 79, 4060-4062 (1997).
(R5)
Probability distribution of the shortest path on the percolation cluster, its backbone, and skeleton
M. Porto, S. Havlin, H.E. Roman, and A. Bunde, Phys. Rev. E (Rapid Comm.) 58, R5205-R5208 (1998).
(R6)
Influence of the cubic anisotropy constants on the hysteresis loops of single-domain particles: A Monte Carlo study
J. García-Otero, M. Porto, J. Rivas, and A. Bunde, J. Appl. Phys. 85, 2287-2292 (1999).
(R7)
Optimal paths in disordered media: Scaling of the crossover from self-similar to self-affine behavior
M. Porto, N. Schwartz, S. Havlin, and A. Bunde, Phys. Rev. E (Rapid Comm.) 60, R2448-R2451 (1999).
(R8)
The influence of dipolar interaction on magnetic properties of ultrafine ferromagnetic particles
J. García-Otero, M. Porto, J. Rivas, and A. Bunde, Phys. Rev. Lett. 84, 167-170 (2000).
(R9)
Hopping transport in the presence of site energy disorder: Temperature and concentration scaling of conductivity spectra
M. Porto, P. Maass, M. Meyer, A. Bunde, and W. Dieterich, Phys. Rev. B 61, 6057-6062 (2000).
(R10)
Looking at friction through `shearons´
M. Porto, M. Urbakh, and J. Klafter, J. Phys. Chem. 104, 3791-3794 (2000).
(Cover story of this `Harvey Scher Festschrift´)
(R11)
Embedded systems under shear: Relationship between shear-induced modes and frictional behavior
M. Porto, M. Urbakh, and J. Klafter, Europhys. Lett. 50, 326-332 (2000).
(R12)
On the Henkel plots of single-domain ferromagnetic particles
J. García-Otero, M. Porto, and J. Rivas, J. Appl. Phys. 87, 7376-7381 (2000).
(R13)
Multifractal behavior of linear polymers in disordered media
A. Ordemann, M. Porto, H.E. Roman, S. Havlin, and A. Bunde, Phys. Rev. E 61, 6858-6865 (2000).
(R14)
Atomic scale engines: Cars and wheels
M. Porto, M. Urbakh, and J. Klafter, Phys. Rev. Lett. 84, 6058-6061 (2000).
(Covered by Physics News Update No. 490 of June 22, 2000, and Nature Science Update of July 3, 2000)
(R15)
Critical packing fraction of rectangular particles on the square lattice
M. Porto and H.E. Roman, Phys. Rev. E 62, 100-102 (2000).
(R16)
Molecular motor that never steps backwards
M. Porto, M. Urbakh, and J. Klafter, Phys. Rev. Lett. 85, 491-495 (2000).
(R17)
Ewald summation of electrostatic interactions of systems with finite extent in two of three dimensions
M. Porto, J. Phys. A: Math. Gen. 33, 6211-6218 (2000).
(R18)
`Generalized des Cloizeaux´ exponent for self-avoiding walks on the incipient percolation cluster
A. Ordemann, M. Porto, H.E. Roman, and S. Havlin, Phys. Rev. E (Rapid Comm.) 63, 020104(R) (2001) (4 pages).
(R19)
Molecular motor based entirely on the Coulomb interaction
M. Porto, Phys. Rev. E (Rapid Comm.) 63, 030102(R) (2001) (4 pages).
(R20)
Self-generated power-law tails in probability distributions
H.E. Roman and M. Porto, Phys. Rev. E 63, 036128 (2001) (4 pages).
(R21)
Anomalous scaling of stock price dynamics within ARCH-models
H.E. Roman, M. Porto, and N. Giovanardi, Eur. Phys. J. B (Rapid Note) 21, 155-158 (2001).
(R22)
Rectification by hopping motion through nonsymmetric potentials: Local versus global bias
M. Porto, Phys. Rev. E 64, 021109 (2001) (4 pages).
(R23)
Hopping motion of interacting particles: From time dependent interaction to directed transport
M. Porto, M. Urbakh, and J. Klafter, Phys. Rev. E 65, 011108 (2002) (6 pages).
(R24)
Self-avoiding walks on Sierpinski lattices in two and three dimensions
A. Ordemann, M. Porto, and H.E. Roman, Phys. Rev. E 65, 021107 (2002) (6 pages).
(R25)
Directed transport of an asymmetric particle pair induced by non-equilibrium conditions
M. Porto, Eur. Phys. J. B 25, 345-350 (2002).
(R26)
Effect of positional disorder in systems of ultrafine ferromagnetic particles
M. Porto, Eur. Phys. J. B 26, 229-234 (2002).
(R27)
Autoregressive processes with exponentially decaying probability distribution functions: Applications to daily variations of a stock market index
M. Porto and H.E. Roman, Phys. Rev. E 65, 046149 (2002) (6 pages).
(R28)
Pure-carbon ring transistor: Role of topology and structure
G. Cuniberti, J. Yi, and M. Porto, Appl. Phys. Lett. 81, 850-852 (2002).
(R29)
Self-avoiding walks on self-similar structures: Finite versus infinite ramification
A. Ordemann, M. Porto, and H.E. Roman, J. Phys. A: Math. Gen. 35, 8029-8041 (2002).
(R30)
Lack of self-averaging in neutral evolution of proteins
U. Bastolla, M. Porto, H.E. Roman, and M. Vendruscolo, Phys. Rev. Lett. 89, 208101 (2002) (4 pages).
(R31)
Relative significance of particle anisotropy in systems of ultrafine ferromagnetic particles
M. Porto, J. Appl. Phys. 92, 6057-6061 (2002).
(R32)
Connectivity of neutral networks, overdispersion, and structural conservation in protein evolution
U. Bastolla, M. Porto, H.E. Roman, and M. Vendruscolo, J. Mol. Evol. 56, 243-254 (2003).
(R33)
Transmittance anomalies of a ring with lead-positional asymmetry
J. Yi, G. Cuniberti, and M. Porto, Eur. Phys. J. B 33, 221-225 (2003).
(R34)
Autoregressive processes with anomalous scaling behavior: Applications to high-frequency variations of a stock market index
C. Dose, M. Porto, and H.E. Roman, Phys. Rev. E 67, 067103 (2003) (4 pages).
(R35)
Reconstruction of protein structures from a vectorial representation
M. Porto, U. Bastolla, H.E. Roman, and M. Vendruscolo, Phys. Rev. Lett. 92, 218101 (2004) (4 pages).
(R36)
Principal eigenvector of contact matrices and hydrophobicity profiles in proteins
U. Bastolla, M. Porto, H.E. Roman, and M. Vendruscolo, Proteins 58, 22-30 (2005).
(R37)
Prediction of site-specific amino acid distributions and limits of divergent evolutionary changes in protein sequences
M. Porto, H.E. Roman, M. Vendruscolo, and U. Bastolla, Mol. Biol. Evol. 22, 630-638 (2005).
(R38)
Ordered systems of ultrafine ferromagnetic particles
M. Porto, Eur. Phys. J. B 45, 369-375 (2005).
(R39)
A protein evolution model with independent sites that reproduces site-specific amino acid distributions from the Protein Data Bank
U. Bastolla, M. Porto, H.E. Roman, and M. Vendruscolo, BMC Evol. Biol. 6, 43 (2006) (21 pages).
(R40)
Multicomponent reaction-diffusion processes on complex networks
S. Weber and M. Porto, Phys. Rev. E 74, 046108 (2006) (8 pages).
(R41)
Violation of the des Cloizeaux relation for self-avoiding walks on Sierpinski square lattices
F. Marini, A. Ordemann, M. Porto, and H.E. Roman, Phys. Rev. E 74, 051102 (2006) (5 pages).
(R42)
Vectorial representation of single- and multi-domain protein folds
F. Teichert and M. Porto, Eur. Phys. J. B 54, 131-136 (2006).
(R43)
Mesoscale engines by nonlinear friction
D. Fleishman, J. Klafter, M. Porto, and M. Urbakh, Nano Lett. 7, 837-842 (2007).
(R44)
Generation of arbitrarily two-point correlated random networks
S. Weber and M. Porto, Phys. Rev. E 76, 046111 (2007) (9 pages).
(R45)
SABERTOOTH: Protein structural alignment based on a vectorial structure representation
F. Teichert, U. Bastolla, and M. Porto, BMC Bioinformatics 8, 425 (2007) (17 pages).
(R46)
Temperature-dependent structural behavior of self-avoiding walks on Sierpinski carpets
M. Fritsche, H.E. Roman, and M. Porto, Phys. Rev. E 76, 061101 (2007) (5 pages).
(R47)
Generating random networks with given degree-degree correlations and degree-dependent clustering
A. Pusch, S. Weber, and M. Porto, Phys. Rev. E 77, 017101 (2008) (4 pages).
(R48)
Local interactions in protein folding determined through an inverse folding model
U. Bastolla, M. Porto, and A.R. Ortiz, Proteins 71, 278-299 (2008).
(R49)
Impact of Topology on the Dynamical Organization of Cooperation in the Prisoner's Dilemma Game
A. Pusch, S. Weber, and M. Porto, Phys. Rev. E 77, 036120 (2008) (6 pages).
(R50)
Pattern formation and efficiency of reaction-diffusion processes on complex networks
S. Weber, M.-Th. Hütt, and M. Porto, EPL 82, 28003 (2008) (5 pages).
(R51)
Fractional derivatives of random walks: Time series with long-time memory
H.E. Roman and M. Porto, Phys. Rev. E 78, 031127 (2008) (10 pages).
(R52)
Fractional brownian motion with stochastic variance: Modeling absolute returns in stock markets
H.E. Roman and M. Porto, Int. J. Mod. Phys. C 19, 1221-1242 (2008).
(R53)
Skewness, long-time memory, and non-stationarity: Application to leverage effect in financial time series
H.E. Roman M. Porto, and C. Dose, EPL 84, 28001 (2008) (5 pages).
(R54)
Effective connectivity profile: A structural representation that evidences the relationship between protein structures and sequences
U. Bastolla, A.R. Ortiz, M. Porto, and F. Teichert, Proteins 73, 872-888 (2008).
(R55)
Stochastic reconstruction of protein structures from effective connectivity profiles
K. Wolff, M. Vendruscolo, and M. Porto, PMC Biophys. 1, 5 (2008) (13 pages).
(R56)
Fluctuations of company yearly profits versus scaled revenue: Fat tail distribution of Lévy type
H.E. Roman, R.A. Siliprandi, C. Dose, C. Riccardi, and M. Porto, EPL 84, 68003 (2008) (6 pages).
(R57)
Efficiency based strategy spreading in the prisoner's dilemma game
S. Weber and M. Porto, Eur. Phys. J. B 69, 559-603 (2009).
(R58)
Long-time correlations in company profit fluctuations: Presence of extreme events
H.E. Roman, R.A. Siliprandi, C. Dose, and M. Porto, Phys. Rev. E 80, 036114 (2009) (7 pages).
(R59)
Efficient identification of near-native conformations in ab initio protein structure prediction using structural profiles
K. Wolff, M. Vendruscolo, and M. Porto, Proteins 78, 249-258 (2010).
(R60)
Mutation bias favors protein folding stability in the evolution of small populations
R. Méndez, M. Fritsche, M. Porto, and U. Bastolla, PLoS Comput. Biol. 6, e1000767 (2010) (21 pages).
(R61)
High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTH
F. Teichert, J. Minning, U. Bastolla, and M. Porto, BMC Bioinformatics 11, 251 (2010) (14 pages).
(R62)
Comparison of translation loads for standard and alternative genetic codes
S.G. Sammet, U. Bastolla, and M. Porto, BMC Evol. Biol. 10, 178 (2010) (14 pages).
(R63)
Asymmetric folding pathways and transient misfolding in a coarse-grained model of proteins
K. Wolff, M. Vendruscolo, and M. Porto, EPL 94, 48005 (2011) (5 pages)
(R64)
Coarse-grained model for protein folding based on structural profiles
K. Wolff, M. Vendruscolo, and M. Porto, Phys. Rev. E 84, 041934 (2011) (7 pages).
(R65)
Network evolution towards optimal dynamical performance
S. Karalus and M. Porto, EPL 99, 38002 (2012) (5 pages).
(R66)
Detecting selection for negative design in proteins through an improved model of the misfolded state
J. Minning, M. Porto, and U. Bastolla, Proteins (in print).

Articles in Proceedings of Conferences in International Journals and Books

(1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, and latest)

(P1)
Structure of self-avoiding walks on percolation clusters at criticality
H.E. Roman, A. Ordemann, M. Porto, A. Bunde, and S. Havlin, Phil. Mag. B 77, 1357-1371 (1998).
(International Minerva Workshop on `Mesoscopics, Fractals, and Neural Networks´, Eilat, Israel, March 25 to 27, 1997)
(P2)
Physik auf fraktalen Strukturen
A. Bunde, M. Porto, and H.E. Roman, in Fraktale im Unterricht – Zur didaktischen Bedeutung des Fraktalbegriffs, edited by M. Komorek, M. Schnegelberger, and R. Duit, Materialien des Instituts für Pädagogik der Naturwissenschaften (IPN), Kiel 1998, pp. 255-273.
(IPN Symposium on `Didaktik des Fraktalbegriffs´, Kiel, Germany, December 1996)
(P3)
Distribution of dangling ends of the incipient percolation cluster
M. Porto, A. Bunde, and S. Havlin, Physica A 266, 96-99 (1999).
(International Conference `Percolation and Disordered Systems´, Rauischholzhausen, Germany, July 14 to 17, 1998)
(P4)
Optimal path in weak and strong disorder
N. Schwartz, M. Porto, S. Havlin, and A. Bunde, Physica A 266, 317-321 (1999).
(International Conference `Percolation and Disordered Systems´, Rauischholzhausen, Germany, July 14 to 17, 1998)
(P5)
Monte Carlo simulation of hysteresis loops of single-domain particles with cubic anisotropy and their temperature dependence
J. García-Otero, M. Porto, J. Rivas, and A. Bunde, J. Magn. Magn. Mater. 203, 268-270 (1999).
(International Conference on `Magnetism of Nanostructured Phases´, San Sebastian, Spain, September 4 to 6, 1998)
(P6)
Macroscopic versus Microscopic Description of Friction: From Tomlinson Model to Shearons
M. Porto, V. Zaloj, M. Urbakh, and J. Klafter, Trib. Lett. 9, 45-54 (2000).
(International Conference `Nanotribology: Theory, Experiment, Applications´, Ubud, Bali, April 11 to 14, 2000)
(P7)
Atomic scale friction: From basic characteristics to control
M. Porto, M. Urbakh, and J. Klafter, in Interfacial Properties on the Submicron Scale, edited by J.E. Frommer and R.M. Overney, ACS Symposium Series No. 781, American Chemical Society, Washington, DC, 2001, pp. 94-112.
(Session `Interfacial Properties on the Submicron Scale´ at the Fall 1999 Meeting of the American Chemical Society, New Orleans, USA, August 22 to 26, 1999)
(P8)
Atomic scale engines: Taking a turn
M. Porto, M. Urbakh, and J. Klafter, Acta Phys. Pol. B 32, 295-306 (2001).
(XXIV International School of Theoretical Physics `Transport Phenomena from Quantum to Classical Regimes´, Ustron, Poland, September 25 to October 1, 2000)
(P9)
Towards a Microscopic Description of Friction
M. Porto, V. Zaloj, M. Urbakh, and J. Klafter, in Dynamics in Small Confining Systems V, edited by J.M. Drake, J. Klafter, P. Levitz, R.M. Overney, and M. Urbakh, MRS Symposium Proceedings No. 651, Materials Research Society, Pittsburgh, 2001, pp. T4.3.1-T4.3.12.
(Session `Dynamics in Small Confining Systems VI´ at the Fall 2000 Meeting of the Materials Research Society, Boston, USA, November 26 to December 1, 2000)
(P10)
Asset-asset interactions and clustering in financial markets
G. Cuniberti, M. Porto, and H.E. Roman, Physica A 299, 262-267 (2001).
(NATO Advanced Research Workshop on `Application of Physics in Economic Modelling´, Prague, Czech Republic, February 8 to 10, 2001)
(P11)
Motors on the molecular scale
M. Porto, M. Urbakh, and J. Klafter, J. Luminescence 94-95, 137-142 (2001).
(International Conference on `Dynamical Processes in Excited States of Solids´, Lyon, France, July 1 to 4, 2001)
(P12)
Statistical properties of neutral evolution
U. Bastolla, M. Porto, H.E. Roman, and M. Vendruscolo, J. Mol. Evol. 57, S103-S119 (2003).
(International Conference `Molecular Evolution – Evolution, Genomics, Bioinformatics´, Sorrento, Italy, June 13 to 16, 2002)
(P13)
Looking at structure, stability, and evolution of proteins through the principal eigenvector of contact matrices and hydrophobicity profiles
U. Bastolla, M. Porto, H.E. Roman, and M. Vendruscolo, Gene 347, 219-230 (2005).
(International Conference `Structural approaches to sequence evolution: Molecules, networks, populations´, Dresden, Germany, July 4 to 10, 2003)
(P14)
Very slowly decaying auto-correlations: Application to volatility in financial markets
H.E. Roman and M. Porto, International Journal of Pure and Applied Mathematics 42, 249-254 (2008).
(International Conference `Fourth International Conference of Applied Mathematics and Computing´, Plovdiv, Bulgaria, August 12 to 18, 2007)
(P15)
A stochastic method for the reconstruction of protein structures from one-dimensional structural profiles
K. Wolff, M. Vendruscolo, and M. Porto, Gene 422, 47-51 (2008).
(International Conference `Physical and chemical foundations of bioinformatics methods´, Dresden, Germany, June 18 to 22, 2007)
(P16)
Protein Structure Alignment through a Contact Topology Profile using SABERTOOTH
F. Teichert, U. Bastolla, and M. Porto, in German Conference on Bioinformatics – GCB 2008, edited by A. Beyer and M. Schroeder, Lecture Notes in Informatics No. P-136, Gesellschaft für Informatik e.V., Bonn, 2008, pp. 75-84.
(International Conference `German Conference on Bioinformatics 2008´, Dresden, Germany, September 9 to 12, 2008)

Invited and Contributed Review Chapters in Books

(1996, 1997, 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, and latest)

(C1)
Random walks on fractals
A. Bunde, J. Dräger, and M. Porto, in Computational Physics: Selected Methods – Simple Exercises – Serious Applications, edited by K.H. Hoffmann and M. Schreiber, Springer, Berlin, Heidelberg, 1996, pp. 121-146.
(C2)
Modeling of carbon-based nanojunctions (Invited Chapter)
J. Yi, G. Cuniberti, and M. Porto, in Encyclopedia of Nanoscience and Nanotechnology, edited by H.S. Nalwa, American Scientific Publishers, 2004, vol. 5, pp. 607-617.
(C3)
Self-avoiding walks on deterministic and random fractals: Numerical results (Invited Chapter)
A. Ordemann, H.E. Roman, and M. Porto, in Statistics of Linear Polymers in Disordered Media, edited by B.K. Chakrabarti, Elsevier, Amsterdam, London, 2005, pp. 195-233.
(C4)
The structurally constrained neutral model of protein evolution
U. Bastolla, M. Porto, H.E. Roman, and M. Vendruscolo, in Structural approaches to sequence evolution: Molecules, networks, populations, edited by U. Bastolla, M. Porto, H.E. Roman, and M. Vendruscolo, Springer, Berlin, 2007, pp. 75-113.
(C5)
Long-time correlations and anomalous price fluctuations in stock markets
M. Porto and H.E. Roman, in Anomalous Fluctuations in Complex Systems: Plasmas, Fluids and Financial Markets, edited by C. Riccardi and H.E. Roman, Transworld Research Network, Kerala, 2007, pp. 335-354.
(C6)
Modeling structural and genomic constraints in the evolution of proteins
U. Bastolla and M. Porto, in Computational modeling of biological systems: From molecules to pathways, edited by N.V. Dokholyan, Springer, Berlin, 2012.

Edited Books and Edited Issues of International Journals

(2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, and latest)

(E1)
Guest Editor of Gene for Issues 345(1) and 347(2)
together with U. Bastolla, H.E. Roman, and M. Vendruscolo.
(International Conference `Structural approaches to sequence evolution: Molecules, networks, populations´, Dresden, Germany, July 4 to 10, 2004).
(E2)
Structural approaches to sequence evolution: Molecules, networks, populations
U. Bastolla, M. Porto, H.E. Roman, and M. Vendruscolo, eds.
Springer Series `Biological and Medical Physics/Biomedical Engineering´, Springer, Berlin, Heidelberg, 2007.
(International Conference `Structural approaches to sequence evolution: Molecules, networks, populations´, Dresden, Germany, July 4 to 10, 2004).
(E3)
Guest Editor of Gene for Issue 422(1-2)
together with H.E. Roman and M. Vendruscolo.
(International Conference `Physical and chemical foundations of bioinformatics methods´, Dresden, Germany, June 18 to 22, 2007).
(E4)
Guest Editor of Proteomics for Issue 10(23)
together with H.E. Roman and M. Vendruscolo.
(International Conference `Physical principles of protein behavior in the cell´, Dresden, Germany, October 26 to 30, 2009).

Invited Colloquium Talks and Invited and Contributed Talks at International Conferences

(2000, 2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, and latest)

(T1)
Atomic scale engines: Cars and wheels (Invited Talk)
XXIV International School of Theoretical Physics `Transport Phenomena from Quantum to Classical Regime´, Ustron, Poland, September 25 to October 1, 2000.
International Scientific Committee: J. Luczka (Director), R.D. Astumian, U. Eckern, J. Imry, S. Linz, L. Schimansky-Geier, and P. Talkner.
(T2)
Motors on the mesoscopic to molecular scale
International Conference `Nano-Physics and Bio-Electronics: A new Odyssey´, Max-Planck-Institut für Physik komplexer Systeme, Dresden, Germany, August 6 to 31, 2001.
International Scientific Committee: T. Chakraborty, F. Peeters, and U. Sivan.
(T3)
Motors on the mesoscopic to molecular scale (Invited Talk)
International Conference `Nanobiology 2001´, Emory University, Atlanta, USA, October 25 to 27, 2001.
International Scientific Committee: F. Family (Chair), M. Arizmendi, and T. Vicsek.
(T4)
Motors on the mesoscopic to molecular scale (Invited Colloquium Talk)
Colloquium at the Department of Physics and Astronomy, University of Missouri at St. Louis, St. Louis, USA, April 5, 2002.
Inivited by F. Moss.
(T5)
Proteins: Structure, Function, and Evolution (Invited Talk)
`Hauptvortrag´ within the Division `Biological Physics´ at the Spring Meeting of the German Physical Society, Universität Regensburg, Regensburg, Germany, March 8 to 12, 2004.
Scientific Committee: E. Sackmann, E. Frey, and A. Haase.
(T6)
Proteins: Structure, Function, and Evolution (Invited Talk)
ESF Workshop `Statistical Physics of Molecular and Cell Biological Systems and Networks´, Ruprecht-Karls-Universität Heidelberg, Heidelberg, Germany, April 1 to 3, 2004.
International Scientific Committee: B. Drossel, J. Hertz, H. Horner, R. Kühn, and F. Ritort.
(T7)
Proteins: Structure, Function, and Evolution (Inaugural Talk)
Colloquium of Theoretical Physics at the Fachbereich Physik, Technische Universität Darmstadt, Darmstadt, Germany, June 14, 2004.
Inivited by G. Alber.
(T8)
Proteins: Structure, Function, and Evolution (Invited Talk)
Sommer School `Methods to Determine Structure of Proteins and of Cellular Components´, of the Graduiertenkolleg 340 `Communication in Biological Systems´, Hirschegg/Kleinwalsertal, Austria, September 11 to 18, 2004.
Invited by F. Pfeifer.
(T9)
Reaction-diffusion processes on scale-free networks
International Conference `Dynamics on Complex Networks and Applications´, Max-Planck-Institut für Physik komplexer Systeme, Dresden, Germany, February 13 to 17, 2006.
International Scientific Committee: J. Kurths, M.A. Matías, and A.E. Motter.
(T10)
Proteins: Structure, Function, and Evolution (Invited Colloquium Talk)
Colloquium at the Institut für Physik, Technische Universität Ilmenau, Ilmenau, Germany, May 22, 2007.
Inivited by P. Maass.
(T11)
Proteins: Structure, Function, and Evolution (Invited Colloquium Talk)
Colloquium of Theoretical Physics at the Fachbereich Physik, Carl von Ossietzky Universität Oldenburg, July 19, 2007.
Inivited by A. Hartmann.
(T12)
Protein Structure Alignment through a Contact Topology Profile using SABERTOOTH
German Conference on Bioinformatics 2008, Technische Universität Dresden, Dresden, Germany, September 9 to 12, 2008.
International Scientific Committee: A. Beyer, A. Deutsch, B. Habermann, M. Schroeder, and P. Tomancak.
(T13)
High Quality Protein Sequence Alignment by combining Structural Profile Prediction and Structural Profile Alignment with SABERTOOTH
International Conference `Structural Bioinformatics and Beyond´, Madrid, Spain, January 25 to 28, 2009.
International Scientific Committee: U. Bastolla, P. Chacón, C. Fàbrega, F. Gago, and A. Morreale.
(T14)
Extreme mutation bias favors protein folding stability in the evolution of small populations
International Conference `13th Evolutionary Biology Meeting´, Marseilles, France, September 22 to 25, 2009.
International Scientific Committee: P. Pontarotti, E. Danchin, V. Lopez Rascol, A. Levasseur, O. Chabrol, and A. Pontarotti.
(T15)
Proteins: Structure, Function, and Evolution (Invited Colloquium Talk)
Colloquium of Theoretical Physics at the Fachgruppe Physik, Universität zu Köln, Germany, April 16, 2010.
Invited by J. Krug.
(T16)
Proteins: Structure, Function, and Evolution (Invited Colloquium Talk)
Colloquium of Physics at the Fachbereich Physik, Freie Universität Berlin, November 26, 2010.
Invited by S. Russ.
(T17)
Proteins: Structure, Function, and Evolution (Invited Colloquium Talk)
Colloquium of Physics at the Fachbereich Physik, Technische Universität Berlin, June 7, 2012.
Invited by K. Wolff.