Documentation for package `GraphAlignment' version 1.0-0

User Guides and Package Vignettes

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Help Pages

AlignedPairs Get aligned node pairs
AlignNetworks Align networks
AnalyzeAlignment Analyze an alignment
ComputeLinkParameters Compute link parameters
ComputeM Compute score matrix M
ComputeNodeParameters Compute node parameters
ComputeScores Compute scores
CreateScoreMatrix Create score matrix
EncodeDirectedGraph Encode directed graph
GenerateExample Generate example input data
GetBinNumber Get bin number
InitialAlignment Create initial alignment
InvertPermutation Invert permutation
LinearAssignment Solve linear assignment problem
MatrixToBin Convert matrix to bin representation
Permute Permute rows and columns of a matrix
Trace Calculate trace of a matrix
VectorToBin Convert vector to bin representation